Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Email Kevin Byrne Wolfe Laboratory Website 30% of length of longest homolog ( 1017 nt / 3369 nt ) YBR050C (REG2) - Chr2 complement(337183..338199) - Regulatory subunit of the Glc7p type-1 protein phosphatase; involved with Reg1p, Glc7p, and Snf1p in regulation of glucose-repressible genes, also involved in glucose-induced proteolysis of maltose permease Click for Info Click for BLAST results Anc_3.258 Anc_5.209 Anc_1.202 Anc_5.208 Anc_5.390 Anc_5.675 Anc_1.497 Anc_5.674 85% of length of longest homolog ( 2856 nt / 3369 nt ) PKUD0D01020 - Chr4 (180321..183176) - similar to Saccharomyces cerevisiae YDR028C (REG1) and YBR050C (REG2); ancestral locus Anc_3.258 Click for BLAST results 93% of length of longest homolog ( 2013 nt / 2172 nt ) PKUD0E05120 - Chr5 (1084921..1086933) - similar to Saccharomyces cerevisiae YLL007C; ancestral locus Anc_5.209 Click for BLAST results 100% of length of longest homolog ( 1041 nt / 1041 nt ) PKUD0B05420 - Chr2 complement(1121015..1122055) - similar to Saccharomyces cerevisiae YKR062W (TFA2); ancestral locus Anc_1.202 Click for BLAST results 97% of length of longest homolog ( 2379 nt / 2448 nt ) Click for intergenic sequence PKUD0E05130 - Chr5 (1087274..1089652) - similar to Saccharomyces cerevisiae YLL008W (DRS1); ancestral locus Anc_5.208 Click for BLAST results 92% of length of longest homolog ( 1044 nt / 1140 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0E05140 - Chr5 complement(1089970..1091013) - Pfam Domains: PIR(6.2e-13) Click for BLAST results 93% of length of longest homolog ( 1932 nt / 2088 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0E05150 - Chr5 complement(1091556..1093487) - similar to Saccharomyces cerevisiae YDR338C; ancestral locus Anc_5.390 Click for BLAST results 100% of length of longest homolog ( 75 nt / 75 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence PKUD0Etrna12K - Chr5 complement(1094501..1094537,1094561..1094598) - tRNA-Lys 100% of length of longest homolog ( 72 nt / 72 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0Etrna11E - Chr5 complement(1094607..1094678) - tRNA-Glu 100% of length of longest homolog ( 18947 nt / 18947 nt ) Click for intergenic sequence Click for intergenic sequence Pkud_MGOB_CEN5 - Chr5 (1094870..1113816) - centromere 5 100% of length of longest homolog ( 990 nt / 990 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0E05160 - Chr5 complement(1097599..1098588) - Pfam Domains: RVT_1(1.6e-40) Click for BLAST results 100% of length of longest homolog ( 74 nt / 74 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0Etrna7N - Chr5 (1114145..1114218) - tRNA-Asn 100% of length of longest homolog ( 71 nt / 71 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0Etrna14G - Chr5 (1131823..1131893) - tRNA-Gly 100% of length of longest homolog ( 72 nt / 72 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0Etrna8D - Chr5 (1131898..1131969) - tRNA-Asp 87% of length of longest homolog ( 3240 nt / 3741 nt ) Click for intergenic sequence PKUD0E05210 - Chr5 complement(1132091..1135330) - similar to Saccharomyces cerevisiae YKR082W (NUP133); ancestral locus Anc_5.675 Click for BLAST results 91% of length of longest homolog ( 3729 nt / 4086 nt ) PKUD0C01570 - Chr3 complement(330069..333797) - similar to Saccharomyces cerevisiae YML049C (RSE1); ancestral locus Anc_1.497 Click for BLAST results 95% of length of longest homolog ( 1002 nt / 1059 nt ) Click for intergenic sequence PKUD0E05220 - Chr5 (1135679..1136680) - similar to Saccharomyces cerevisiae YKR081C (RPF2); ancestral locus Anc_5.674 Click for BLAST results 100% of length of longest homolog ( 3369 nt / 3369 nt ) PICMEDRAFT_174556 - s6 (203869..207237) Click for BLAST results 100% of length of longest homolog ( 2172 nt / 2172 nt ) PICMEDRAFT_17208 - s4 (966220..968391) Click for BLAST results 59% of length of longest homolog ( 615 nt / 1041 nt ) contains intron(s) PICMEDRAFT_27448 - s3 complement(1346526..1346747,1346868..1347260) Click for BLAST results 98% of length of longest homolog ( 2394 nt / 2448 nt ) Click for intergenic sequence PICMEDRAFT_17209 - s4 (968666..971059) - GO_function: GO:3676; ATP binding - nucleic acid binding [Evidence 8026; helicase activity ] [PMID 5524] Click for BLAST results 100% of length of longest homolog ( 1140 nt / 1140 nt ) Click for intergenic sequence Click for intergenic sequence PICMEDRAFT_17212 - s4 complement(971347..972486) Click for BLAST results 92% of length of longest homolog ( 1917 nt / 2088 nt ) Click for intergenic sequence PICMEDRAFT_12398 - s4 complement(973053..974969) - GO_component: GO:16020 - membrane; GO_function: GO:15238; antiporter activity - drug transporter activity [PMID 15297]; GO_process: GO:6855 - multidrug transport Click for BLAST results 91% of length of longest homolog ( 3393 nt / 3741 nt ) PICMEDRAFT_18606 - s9 (204628..208020) Click for BLAST results 98% of length of longest homolog ( 3996 nt / 4086 nt ) contains intron(s) PICMEDRAFT_60418 - s6 (488530..488584,488682..492622) - GO_component: GO:5634 - nucleus; GO_function: GO:3676 - nucleic acid binding Click for BLAST results 96% of length of longest homolog ( 1020 nt / 1059 nt ) Click for intergenic sequence PICMEDRAFT_13900 - s9 complement(203240..204259) Click for BLAST results 10% of length of longest homolog ( 342 nt / 3369 nt ) BBRU0B00410 - s2 (82773..83114) - Anc_3.258 YBR050C|YDR028C Click for BLAST results 89% of length of longest homolog ( 1932 nt / 2172 nt ) BBRU0A07890 - s1 (1943342..1945273) - Anc_5.209 YLL007C Click for BLAST results 84% of length of longest homolog ( 876 nt / 1041 nt ) BBRU0D05000 - s4 (1185136..1186011) - Anc_1.202 YKR062W Click for BLAST results 100% of length of longest homolog ( 2448 nt / 2448 nt ) BBRU0A07900 - s1 complement(1945415..1947862) - Anc_5.208 YLL008W Click for BLAST results 92% of length of longest homolog ( 1920 nt / 2088 nt ) BBRU0A07860 - s1 (1936179..1938098) - Click for BLAST results 38% of length of longest homolog ( 1404 nt / 3741 nt ) BBRU0D01880 - s4 (445272..446675) - Anc_5.675 YKR082W Click for BLAST results 25% of length of longest homolog ( 1032 nt / 4086 nt ) BBRU0D03670 - s4 complement(896443..897474) - Anc_1.497 YML049C Click for BLAST results 100% of length of longest homolog ( 1011 nt / 1011 nt ) Click for intergenic sequence BBRU0D01870 - s4 (443255..444265) - Click for BLAST results 92% of length of longest homolog ( 978 nt / 1059 nt ) Click for intergenic sequence Click for intergenic sequence BBRU0D01860 - s4 complement(441960..442937) - Anc_5.674 YKR081C Click for BLAST results 69% of length of longest homolog ( 2331 nt / 3369 nt ) HPODL_02699 - Chr7 complement(578906..581236) - hypothetical protein Click for BLAST results 87% of length of longest homolog ( 1884 nt / 2172 nt ) HPODL_01999 - Chr1 (328233..330116) - hypothetical protein Click for BLAST results 78% of length of longest homolog ( 816 nt / 1041 nt ) HPODL_01356 - Chr6 complement(445249..446064) - Transcription initiation factor IIE subunit beta Click for BLAST results 92% of length of longest homolog ( 2244 nt / 2448 nt ) HPODL_02000 - Chr1 complement(330146..332389) - ATP-dependent RNA helicase DRS1 Click for BLAST results 90% of length of longest homolog ( 1872 nt / 2088 nt ) HPODL_00646 - Chr3 (850116..851987) - putative transporter Click for BLAST results 83% of length of longest homolog ( 3099 nt / 3741 nt ) HPODL_02602 - Chr7 (381889..384987) - Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) Click for BLAST results 88% of length of longest homolog ( 3612 nt / 4086 nt ) HPODL_04406 - Chr5 complement(1123327..1126938) - Protein involved in pre-mRNA splicing Click for BLAST results 100% of length of longest homolog ( 1059 nt / 1059 nt ) Click for intergenic sequence HPODL_02601 - Chr7 complement(380705..381763) - Ribosome biogenesis protein RPF2 Click for BLAST results 69% of length of longest homolog ( 2328 nt / 3369 nt ) OPOL_74786 - s1 (930712..933039) Click for BLAST results 87% of length of longest homolog ( 1881 nt / 2172 nt ) OPOL_78213 - s7 complement(617941..619821) Click for BLAST results 78% of length of longest homolog ( 816 nt / 1041 nt ) OPOL_92588 - s2 complement(446157..446972) Click for BLAST results 92% of length of longest homolog ( 2244 nt / 2448 nt ) OPOL_35965 - s7 (615668..617911) Click for BLAST results 90% of length of longest homolog ( 1872 nt / 2088 nt ) OPOL_101581 - s5 (842785..844656) Click for BLAST results 1% of length of longest homolog ( 238 nt / 18947 nt ) OPOL_MGOB_CEN7 - s7 complement(624917..625154) - misc_feature 83% of length of longest homolog ( 3099 nt / 3741 nt ) OPOL_92178 - s1 complement(1127429..1130527) Click for BLAST results 88% of length of longest homolog ( 3612 nt / 4086 nt ) OPOL_82000 - s3 (221571..225182) Click for BLAST results 100% of length of longest homolog ( 1059 nt / 1059 nt ) Click for intergenic sequence OPOL_92179 - s1 (1130656..1131714) Click for BLAST results 69% of length of longest homolog ( 2340 nt / 3369 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00001658001 - s2 complement(703153..705492) Click for BLAST results 88% of length of longest homolog ( 1902 nt / 2172 nt ) contains intron(s) Click for intergenic sequence KUCA_T00001657001 - s2 complement(700724..702564,702640..702700) Click for BLAST results 82% of length of longest homolog ( 855 nt / 1041 nt ) KUCA_T00001646001 - s2 complement(674339..675193) Click for BLAST results 90% of length of longest homolog ( 2211 nt / 2448 nt ) KUCA_T00001656001 - s2 (698469..700679) Click for BLAST results 78% of length of longest homolog ( 888 nt / 1140 nt ) KUCA_T00003283001 - s4 complement(320359..321246) Click for BLAST results 93% of length of longest homolog ( 1935 nt / 2088 nt ) KUCA_T00002476001 - s3 complement(436327..438261) Click for BLAST results 94% of length of longest homolog ( 3528 nt / 3741 nt ) KUCA_T00004168001 - s5 complement(345361..348888) Click for BLAST results 89% of length of longest homolog ( 3648 nt / 4086 nt ) KUCA_T00001180001 - s1 (2177567..2181214) Click for BLAST results 92% of length of longest homolog ( 969 nt / 1059 nt ) KUCA_T00004169001 - s5 (349117..350085) Click for BLAST results 59% of length of longest homolog ( 1995 nt / 3369 nt ) ATY40_BA7501469 - Chr1 complement(2633118..2635112) - BA75_01469T0 Click for BLAST results 88% of length of longest homolog ( 1905 nt / 2172 nt ) contains intron(s) Click for intergenic sequence ATY40_BA7503805 - Chr3 complement(841717..843566,843613..843667) - BA75_03805T0 Click for BLAST results 81% of length of longest homolog ( 846 nt / 1041 nt ) Click for intergenic sequence Click for intergenic sequence ATY40_BA7503804 - Chr3 (840861..841706) - BA75_03804T0 Click for BLAST results 93% of length of longest homolog ( 2283 nt / 2448 nt ) Click for intergenic sequence ATY40_BA7503803 - Chr3 (838450..840732) - BA75_03803T0 Click for BLAST results 85% of length of longest homolog ( 972 nt / 1140 nt ) Click for intergenic sequence ATY40_BA7502992 - Chr2 (645699..646670) - BA75_02992T0 Click for BLAST results 96% of length of longest homolog ( 2007 nt / 2088 nt ) Click for intergenic sequence ATY40_BA7502991 - Chr2 complement(646845..648851) - BA75_02991T0 Click for BLAST results 92% of length of longest homolog ( 3450 nt / 3741 nt ) Click for intergenic sequence ATY40_BA7503510 - Chr3 complement(324806..328255) - BA75_03510T0 Click for BLAST results 87% of length of longest homolog ( 3540 nt / 4086 nt ) Click for intergenic sequence Click for intergenic sequence ATY40_BA7503511 - Chr3 complement(328358..331897) - BA75_03511T0 Click for BLAST results Click for intergenic sequence 91% of length of longest homolog ( 960 nt / 1059 nt ) Click for intergenic sequence ATY40_BA7503512 - Chr3 (332105..333064) - BA75_03512T0 Click for BLAST results 59% of length of longest homolog ( 1995 nt / 3369 nt ) BQ9382_C1-1985 - Chr1 (695212..697206) - Regulatory subunit of type 1 protein phosphatase Glc7p Click for BLAST results 88% of length of longest homolog ( 1905 nt / 2172 nt ) contains intron(s) Click for intergenic sequence BQ9382_C3-2470 - Chr3 complement(839988..841837,841886..841940) Click for BLAST results 81% of length of longest homolog ( 846 nt / 1041 nt ) Click for intergenic sequence Click for intergenic sequence BQ9382_C3-2465 - Chr3 (839112..839957) - TFIIE small subunit, involved in RNA polymerase II transcription initiation Click for BLAST results 93% of length of longest homolog ( 2286 nt / 2448 nt ) Click for intergenic sequence BQ9382_C3-2460 - Chr3 (836691..838976) - P-loop containing nucleosidetriphosphatehydrolases Click for BLAST results 85% of length of longest homolog ( 972 nt / 1140 nt ) Click for intergenic sequence BQ9382_C4-3645 - Chr4 complement(1181829..1182800) - O-glycosylated protein required for cell wall stability Click for BLAST results 96% of length of longest homolog ( 2007 nt / 2088 nt ) Click for intergenic sequence BQ9382_C4-3640 - Chr4 (1179652..1181658) - Potential MATE family drug/sodium antiporter Click for BLAST results 92% of length of longest homolog ( 3450 nt / 3741 nt ) Click for intergenic sequence BQ9382_C3-1000 - Chr3 complement(322575..326024) - Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) Click for BLAST results 87% of length of longest homolog ( 3540 nt / 4086 nt ) Click for intergenic sequence Click for intergenic sequence BQ9382_C3-1005 - Chr3 complement(326130..329669) - Similar to Pre-mRNA-splicing factor rse1acc.no. Q4WLI5 Click for BLAST results Click for intergenic sequence 91% of length of longest homolog ( 960 nt / 1059 nt ) Click for intergenic sequence BQ9382_C3-1010 - Chr3 (329873..330832) - Ribosome biogenesis protein RPF2 Click for BLAST results 90% of length of longest homolog ( 3033 nt / 3369 nt ) Ptan_386 - s1 complement(863124..866156) - Similar to HEX2_YEAST Protein HEX2 OS Click for BLAST results 91% of length of longest homolog ( 1974 nt / 2172 nt ) Ptan_3989 - s9 complement(81015..82988) - Similar to YL007_YEAST Uncharacterized protein YLL007C OS Click for BLAST results 93% of length of longest homolog ( 966 nt / 1041 nt ) Ptan_2884 - s5 (1027352..1028317) - Similar to T2EB_YEAST Transcription initiation factor IIE subunit beta OS Click for BLAST results 96% of length of longest homolog ( 2349 nt / 2448 nt ) Ptan_3019 - s6 complement(195086..197434) - Similar to DRS1_CANGA ATP-dependent RNA helicase DRS1 OS Click for BLAST results 94% of length of longest homolog ( 1965 nt / 2088 nt ) Ptan_4863 - s13 (121199..123163) - Similar to YD338_YEAST Uncharacterized transporter YDR338C OS Click for BLAST results 100% of length of longest homolog ( 3741 nt / 3741 nt ) Ptan_292 - s1 complement(646865..650605) - Similar to NU133_YEAST Nucleoporin NUP133 OS Click for BLAST results 92% of length of longest homolog ( 3765 nt / 4086 nt ) Ptan_4855 - s13 complement(88491..92255) - Similar to RSE1_ASPFU Pre-mRNA-splicing factor rse1 OS Click for BLAST results 99% of length of longest homolog ( 1044 nt / 1059 nt ) Ptan_293 - s1 (651085..652128) - Similar to RPF2_YEAST Ribosome biogenesis protein RPF2 OS Click for BLAST results 90% of length of longest homolog ( 3045 nt / 3369 nt ) Click for intergenic sequence YDR028C (REG1) - Chr4 complement(497835..500879) - Regulatory subunit of type 1 protein phosphatase Glc7p, involved in negative regulation of glucose-repressible genes Click for Info Click for BLAST results 92% of length of longest homolog ( 1998 nt / 2172 nt ) YLL007C - Chr12 complement(134302..136299) - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLL007C is not an essential gene Click for Info Click for BLAST results 95% of length of longest homolog ( 987 nt / 1041 nt ) YKR062W (TFA2) - Chr11 (559666..560652) - TFIIE small subunit, involved in RNA polymerase II transcription initiation Click for Info Click for BLAST results 92% of length of longest homolog ( 2259 nt / 2448 nt ) YLL008W (DRS1) - Chr12 (131729..133987) - Nucleolar DEAD-box protein required for ribosome assembly and function, including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles Click for Info Click for BLAST results 100% of length of longest homolog ( 2088 nt / 2088 nt ) YDR338C - Chr4 complement(1147379..1149466) - Putative protein of unknown function, member of the multi-drug and toxin extrusion (MATE) family of the multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) exporter superfamily Click for Info Click for BLAST results 93% of length of longest homolog ( 3474 nt / 3741 nt ) YKR082W (NUP133) - Chr11 (592825..596298) - Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis and is involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP133 Click for Info Click for BLAST results 100% of length of longest homolog ( 4086 nt / 4086 nt ) YML049C (RSE1) - Chr13 complement(174220..178305) - Protein involved in pre-mRNA splicing; component of the pre-spliceosome; associates with U2 snRNA; involved in ER to Golgi transport Click for Info Click for BLAST results 98% of length of longest homolog ( 1035 nt / 1059 nt ) YKR081C (RPF2) - Chr11 complement(591506..592540) - Essential protein involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles Click for Info Click for BLAST results MGOB Tabulated Text Format