Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Email Kevin Byrne Wolfe Laboratory Website 100% of length of longest homolog ( 2295 nt / 2295 nt ) YJL090C (DPB11) - Chr10 complement(262757..265051) - Replication initiation protein that loads DNA pol epsilon onto pre-replication complexes at origins; checkpoint sensor recruited to stalled replication forks by the checkpoint clamp complex where it activates Mec1p; ortholog of human TopBP1 Click for Info Click for BLAST results Anc_1.309 Anc_1.276 87% of length of longest homolog ( 540 nt / 618 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0D01060 - Chr4 complement(190009..190548) - similar to Saccharomyces cerevisiae YGL183C (MND1); ancestral locus Anc_8.143 Click for BLAST results 96% of length of longest homolog ( 1263 nt / 1314 nt ) Click for intergenic sequence PKUD0D01070 - Chr4 complement(190859..192121) Click for BLAST results 52% of length of longest homolog ( 444 nt / 849 nt ) PKUD0B09980 - Chr2 (2131212..2131655) - similar to Saccharomyces cerevisiae YNL322C (KRE1); ancestral locus Anc_3.18 Click for BLAST results 100% of length of longest homolog ( 786 nt / 786 nt ) Click for intergenic sequence PKUD0D01075 - Chr4 (193304..194089) Click for BLAST results 80% of length of longest homolog ( 1161 nt / 1449 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0D01080 - Chr4 complement(194339..195499) - similar to Saccharomyces cerevisiae YBR279W (PAF1); ancestral locus Anc_1.309 Click for BLAST results 85% of length of longest homolog ( 1962 nt / 2295 nt ) Click for intergenic sequence PKUD0D01090 - Chr4 (195583..197544) - similar to Saccharomyces cerevisiae YJL090C (DPB11); ancestral locus Anc_1.276 Click for BLAST results 100% of length of longest homolog ( 618 nt / 618 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence PICMEDRAFT_174584 - s6 complement(209915..210529,210598..210600) Click for BLAST results 94% of length of longest homolog ( 1236 nt / 1314 nt ) Click for intergenic sequence Click for intergenic sequence PICMEDRAFT_13313 - s6 complement(210791..212026) Click for BLAST results 100% of length of longest homolog ( 729 nt / 729 nt ) Click for intergenic sequence Click for intergenic sequence PICMEDRAFT_18054 - s6 complement(212147..212875) Click for BLAST results 100% of length of longest homolog ( 849 nt / 849 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence PICMEDRAFT_18055 - s6 (213331..213457,213470..213661,213692..214221) Click for BLAST results Click for intergenic sequence 82% of length of longest homolog ( 1191 nt / 1449 nt ) Click for intergenic sequence Click for intergenic sequence PICMEDRAFT_74358 - s6 complement(214552..215742) Click for BLAST results 85% of length of longest homolog ( 1956 nt / 2295 nt ) Click for intergenic sequence PICMEDRAFT_18057 - s6 (216032..217987) - GO_component: GO:5622 - intracellular Click for BLAST results Click for intergenic sequence 95% of length of longest homolog ( 1251 nt / 1314 nt ) Click for intergenic sequence BBRU0B00450 - s2 complement(93302..94552) - Click for BLAST results 83% of length of longest homolog ( 702 nt / 849 nt ) BBRU0B04330 - s2 complement(1013225..1013926) - Click for BLAST results 92% of length of longest homolog ( 1329 nt / 1449 nt ) Click for intergenic sequence BBRU0B00460 - s2 complement(95448..96776) - Anc_1.309 YBR279W Click for BLAST results 48% of length of longest homolog ( 1104 nt / 2295 nt ) Click for intergenic sequence BBRU0B00470 - s2 (98245..99348) - Click for BLAST results 81% of length of longest homolog ( 684 nt / 849 nt ) HPODL_01393 - Chr6 (502078..502761) - putative secreted protein Click for BLAST results 43% of length of longest homolog ( 627 nt / 1449 nt ) Click for intergenic sequence HPODL_02697 - Chr7 (576582..577208) - hypothetical protein Click for BLAST results 79% of length of longest homolog ( 1815 nt / 2295 nt ) Click for intergenic sequence Click for intergenic sequence HPODL_02696 - Chr7 complement(573871..575685) - Nucleotide excision repair factor NEF2, RAD4/CUT5 component Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 82% of length of longest homolog ( 693 nt / 849 nt ) OPOL_15636 - s2 (502924..503616) Click for BLAST results 86% of length of longest homolog ( 1251 nt / 1449 nt ) Click for intergenic sequence OPOL_15309 - s1 complement(934737..935987) Click for BLAST results 79% of length of longest homolog ( 1815 nt / 2295 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_74789 - s1 (936258..938072) Click for BLAST results 100% of length of longest homolog ( 2697 nt / 2697 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_11_HARS-in-pYT3-AF347016 - s1 (938109..940805) - rep_origin 100% of length of longest homolog ( 235 nt / 235 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_CEN1 - s1 (940244..940478) - misc_feature 100% of length of longest homolog ( 96 nt / 96 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_13_R1a - s1 (941712..941807) - misc_feature 100% of length of longest homolog ( 321 nt / 321 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_14_LTR_cecile_321 - s1 complement(941947..942267) - LTR 100% of length of longest homolog ( 4254 nt / 4254 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_15_Tpa5_ncyc_s1,-almost-identical-to-copy-on-chr3-and-Neuveglise - s1 complement(942291..946544) - J_segment 100% of length of longest homolog ( 1 nt / 1 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_16_SNP-wrt-chr3 - s1 (943449..943449) - variation 100% of length of longest homolog ( 1 nt / 1 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_17_SNP-wrt-chr3 - s1 (943563..943563) - variation 100% of length of longest homolog ( 320 nt / 320 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_18_LTR_cecile - s1 complement(946507..946826) - LTR 100% of length of longest homolog ( 258 nt / 258 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_19_LTR_nuri_258 - s1 (946847..947104) - LTR 100% of length of longest homolog ( 96 nt / 96 nt ) Click for intergenic sequence Click for intergenic sequence OPOL_MGOB_MISC_20_R1b - s1 complement(947563..947658) - misc_feature Click for intergenic sequence 100% of length of longest homolog ( 1314 nt / 1314 nt ) Click for intergenic sequence KUCA_T00002174001 - s2 complement(1639643..1640956) Click for BLAST results 78% of length of longest homolog ( 660 nt / 849 nt ) KUCA_T00003071001 - s3 (1579349..1580008) Click for BLAST results 88% of length of longest homolog ( 1278 nt / 1449 nt ) KUCA_T00002175001 - s2 complement(1641080..1642357) Click for BLAST results 73% of length of longest homolog ( 1665 nt / 2295 nt ) KUCA_T00002190001 - s2 (1666342..1668006) Click for BLAST results 89% of length of longest homolog ( 1293 nt / 1449 nt ) Click for intergenic sequence ATY40_BA7504379 - Chr4 (1529410..1530702) - BA75_04379T0 Click for BLAST results 86% of length of longest homolog ( 1983 nt / 2295 nt ) Click for intergenic sequence ATY40_BA7504380 - Chr4 (1527368..1529350) - BA75_04380T0 Click for BLAST results 82% of length of longest homolog ( 1182 nt / 1449 nt ) Click for intergenic sequence BQ9382_C4-0140 - Chr4 complement(47699..48880) - RNA polymerase II-associated protein 1 Click for BLAST results 81% of length of longest homolog ( 1863 nt / 2295 nt ) Click for intergenic sequence BQ9382_C4-0145 - Chr4 complement(49055..50917) - DNA Polymerase II Epsilon complex with BRCT domain Click for BLAST results 94% of length of longest homolog ( 1236 nt / 1314 nt ) Click for intergenic sequence Ptan_931 - s2 complement(574317..575552) - No similarities. Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence 100% of length of longest homolog ( 1449 nt / 1449 nt ) Click for intergenic sequence Click for intergenic sequence Ptan_930 - s2 (572687..574135) - Similar to PAF1_YEAST RNA polymerase II-associated protein 1 OS Click for BLAST results 86% of length of longest homolog ( 1983 nt / 2295 nt ) Click for intergenic sequence Ptan_929 - s2 (570452..572434) - Similar to RAD4_SCHPO S-M checkpoint control protein rad4 OS Click for BLAST results 92% of length of longest homolog ( 1338 nt / 1449 nt ) YBR279W (PAF1) - Chr2 (761257..762594) - Component of the Paf1p complex involved in transcription elongation; binds to and modulates the activity of RNA polymerases I and II; required for expression of a subset of genes, including cell cycle-regulated genes; involved in SER3 repression by helping to maintain SRG1 transcription-dependent nucleosome occupancy; homolog of human PD2/hPAF1 Click for Info Click for BLAST results MGOB Tabulated Text Format