Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Click for FASTA nucleotide sequences for this column Click for phylogenetic tree of this column Click for multiple sequence alignment for this column Click for FASTA protein sequences for this column Click for FASTA nucleotide sequences for this column Email Kevin Byrne Wolfe Laboratory Website 87% of length of longest homolog ( 738 nt / 852 nt ) YGL098W (USE1) - Chr7 (317342..318079) - Essential SNARE protein localized to the ER, involved in retrograde traffic from the Golgi to the ER; forms a complex with the SNAREs Sec22p, Sec20p and Ufe1p Click for Info Click for BLAST results 90% of length of longest homolog ( 1752 nt / 1938 nt ) YPL208W (RKM1) - Chr16 (157842..159593) - SET-domain lysine-N-methyltransferase, catalyzes the formation of dimethyllysine residues on the large ribsomal subunit proteins L23a (Rpl23Ap and Rpl23Bp) and L18 (Rps18Ap and Rps18Bp) Click for Info Click for BLAST results 70% of length of longest homolog ( 1230 nt / 1758 nt ) YJL046W (AIM22) - Chr10 (352386..353615) - Putative lipoate-protein ligase, required along with Lip2 and Lip5 for lipoylation of Lat1p and Kgd2p; similar to E. coli LplA; null mutant displays reduced frequency of mitochondrial genome loss Click for Info Click for BLAST results 100% of length of longest homolog ( 546 nt / 546 nt ) Click for intergenic sequence YDR178W (SDH4) - Chr4 (817950..818495) - Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain Click for Info Click for BLAST results 100% of length of longest homolog ( 489 nt / 489 nt ) Click for intergenic sequence Click for intergenic sequence YDR179C (CSN9) - Chr4 complement(818708..819196) - Subunit of the Cop9 signalosome, which is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling Click for Info Click for BLAST results 91% of length of longest homolog ( 1392 nt / 1533 nt ) Click for intergenic sequence Click for intergenic sequence YDR179W-A - Chr4 (819433..820824) - Putative protein of unknown function Click for Info Click for BLAST results Click for intergenic sequence Click for intergenic sequence Click for intergenic sequence Anc_6.164 Anc_6.221 Anc_1.346 Anc_1.347 Anc_8.377 Anc_8.378 Anc_8.379 Anc_4.321 89% of length of longest homolog ( 762 nt / 852 nt ) Click for intergenic sequence PKUD0A09660 - Chr1 (2117692..2118453) - similar to Saccharomyces cerevisiae YGL098W (USE1); ancestral locus Anc_6.164 Click for BLAST results Click for intergenic sequence 87% of length of longest homolog ( 1695 nt / 1938 nt ) Click for intergenic sequence Click for intergenic sequence PKUD0A09670 - Chr1 complement(2118434..2120128) Click for BLAST results 89% of length of longest homolog ( 672 nt / 759 nt ) Click for intergenic sequence PKUD0A09675 - Chr1 complement(2120646..2121317) Click for BLAST results 74% of length of longest homolog ( 870 nt / 1173 nt ) PKUD0B07510 - Chr2 (1584971..1585840) - similar to Saccharomyces cerevisiae YBR257W (POP4); ancestral locus Anc_1.346 Click for BLAST results 99% of length of longest homolog ( 1740 nt / 1758 nt ) PKUD0E02700 - Chr5 (559491..561230) - similar to Saccharomyces cerevisiae YJL046W (AIM22); ancestral locus Anc_1.347 Click for BLAST results 88% of length of longest homolog ( 480 nt / 546 nt ) PKUD0E04220 - Chr5 (883752..884231) - similar to Saccharomyces cerevisiae YDR178W (SDH4) and YLR164W (SHH4); ancestral locus Anc_8.377 Click for BLAST results 90% of length of longest homolog ( 1386 nt / 1533 nt ) PKUD0A06490 - Chr1 complement(1418858..1420243) - similar to Saccharomyces cerevisiae YDR179W-A; ancestral locus Anc_8.379 Click for BLAST results 98% of length of longest homolog ( 1173 nt / 1200 nt ) PKUD0A04610 - Chr1 (1019477..1020649) - similar to Saccharomyces cerevisiae YML060W (OGG1); ancestral locus Anc_4.321 Click for BLAST results 81% of length of longest homolog ( 690 nt / 852 nt ) contains intron(s) Click for intergenic sequence PICMEDRAFT_74006 - s5 complement(831703..831729,831764..832426) Click for BLAST results Click for intergenic sequence 86% of length of longest homolog ( 1659 nt / 1938 nt ) Click for intergenic sequence Click for intergenic sequence PICMEDRAFT_74005 - s5 (829950..831608) Click for BLAST results 100% of length of longest homolog ( 759 nt / 759 nt ) Click for intergenic sequence PICMEDRAFT_74004 - s5 (828783..829541) Click for BLAST results 75% of length of longest homolog ( 879 nt / 1173 nt ) PICMEDRAFT_71861 - s2 complement(1736848..1737726) Click for BLAST results 100% of length of longest homolog ( 1752 nt / 1758 nt ) PICMEDRAFT_14129 - s1 (585776..587527) - GO_function: GO:3824 - catalytic activity; GO_process: GO:6464 - protein modification process Click for BLAST results 87% of length of longest homolog ( 474 nt / 546 nt ) PICMEDRAFT_59133 - s3 complement(1551513..1551986) - GO_component: GO:5740; integral to membrane - mitochondrial envelope [PMID 16021]; GO_function: GO:5506; heme binding - iron ion binding [PMID 20037]; GO_process: GO:6099 - tricarboxylic acid cycle Click for BLAST results 96% of length of longest homolog ( 1479 nt / 1533 nt ) PICMEDRAFT_73000 - s3 complement(1630768..1632246) - GO_process: GO:7242 - intracellular signaling cascade Click for BLAST results 83% of length of longest homolog ( 993 nt / 1200 nt ) contains intron(s) PICMEDRAFT_18620 - s1 complement(1251386..1251532,1251629..1252186,1252292..1252579) - GO_function: GO:3684; oxidized purine base lesion DNA N-glycosylase activity - damaged DNA binding [PMID 8534]; GO_process: GO:6284; nucleotide-excision repair - base-excision repair [PMID 6289] Click for BLAST results 30% of length of longest homolog ( 252 nt / 852 nt ) Click for intergenic sequence BBRU0A07210 - s1 (1759527..1759778) - Anc_6.164 YGL098W Click for BLAST results 100% of length of longest homolog ( 507 nt / 507 nt ) Click for intergenic sequence Click for intergenic sequence BBRU0A07220 - s1 complement(1759896..1760402) - Click for BLAST results 23% of length of longest homolog ( 441 nt / 1938 nt ) Click for intergenic sequence Click for intergenic sequence BBRU0A07230 - s1 complement(1760613..1761053) - Click for BLAST results 68% of length of longest homolog ( 519 nt / 759 nt ) Click for intergenic sequence BBRU0A07240 - s1 complement(1762120..1762638) - Click for BLAST results 68% of length of longest homolog ( 798 nt / 1173 nt ) Click for intergenic sequence BBRU0B08370 - s2 (1916130..1916927) - Anc_1.346 YBR257W Click for BLAST results 97% of length of longest homolog ( 1704 nt / 1758 nt ) Click for intergenic sequence BBRU0B08360 - s2 complement(1913995..1915698) - Anc_1.347 YJL046W Click for BLAST results 91% of length of longest homolog ( 546 nt / 603 nt ) Click for intergenic sequence BBRU0F00540 - s6 complement(121587..122132) - Click for BLAST results 97% of length of longest homolog ( 531 nt / 546 nt ) Click for intergenic sequence BBRU0F00530 - s6 (120789..121319) - Anc_8.377 YDR178W|YLR164W Click for BLAST results 99% of length of longest homolog ( 1524 nt / 1533 nt ) BBRU0C01080 - s3 complement(233651..235174) - Anc_8.379 YDR179W-A Click for BLAST results 87% of length of longest homolog ( 1041 nt / 1200 nt ) BBRU0A10720 - s1 (2624321..2625361) - Anc_4.321 YML060W Click for BLAST results 88% of length of longest homolog ( 750 nt / 852 nt ) Click for intergenic sequence HPODL_02005 - Chr1 (340446..341195) - putative membrane protein Click for BLAST results Click for intergenic sequence 89% of length of longest homolog ( 1716 nt / 1938 nt ) Click for intergenic sequence HPODL_02006 - Chr1 complement(341213..342928) - hypothetical protein Click for BLAST results 85% of length of longest homolog ( 645 nt / 759 nt ) HPODL_02720 - Chr7 (621766..622410) - hypothetical protein Click for BLAST results 56% of length of longest homolog ( 654 nt / 1173 nt ) Click for intergenic sequence HPODL_00659 - Chr3 (876138..876791) - hypothetical protein Click for BLAST results 84% of length of longest homolog ( 1482 nt / 1758 nt ) Click for intergenic sequence HPODL_00658 - Chr3 complement(874434..875915) - lipoate-protein ligase A Click for BLAST results 77% of length of longest homolog ( 465 nt / 603 nt ) Click for intergenic sequence HPODL_02357 - Chr1 complement(888696..889160) - hypothetical protein Click for BLAST results 85% of length of longest homolog ( 465 nt / 546 nt ) Click for intergenic sequence HPODL_02356 - Chr1 (888195..888659) - Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) Click for BLAST results 83% of length of longest homolog ( 1278 nt / 1533 nt ) HPODL_02365 - Chr1 (897931..899208) - hypothetical protein Click for BLAST results 76% of length of longest homolog ( 918 nt / 1200 nt ) contains intron(s) HPODL_03449 - Chr4 (748995..749039,749075..749947) - N-glycosylase/DNA lyase Click for BLAST results 88% of length of longest homolog ( 750 nt / 852 nt ) Click for intergenic sequence OPOL_10514 - s7 complement(607188..607937) Click for BLAST results Click for intergenic sequence 91% of length of longest homolog ( 1761 nt / 1938 nt ) Click for intergenic sequence OPOL_78207 - s7 (605410..607170) Click for BLAST results 85% of length of longest homolog ( 645 nt / 759 nt ) OPOL_15297 - s1 complement(889535..890179) Click for BLAST results 100% of length of longest homolog ( 1173 nt / 1173 nt ) Click for intergenic sequence OPOL_94950 - s5 (868210..869382) Click for BLAST results 86% of length of longest homolog ( 1518 nt / 1758 nt ) Click for intergenic sequence OPOL_16923 - s5 complement(867036..868553) Click for BLAST results 77% of length of longest homolog ( 465 nt / 603 nt ) Click for intergenic sequence OPOL_95663 - s7 (61018..61482) Click for BLAST results 85% of length of longest homolog ( 465 nt / 546 nt ) Click for intergenic sequence OPOL_102895 - s7 complement(61519..61983) Click for BLAST results 83% of length of longest homolog ( 1278 nt / 1533 nt ) OPOL_95654 - s7 complement(50963..52240) Click for BLAST results 76% of length of longest homolog ( 918 nt / 1200 nt ) contains intron(s) OPOL_94140 - s4 complement(547820..548692,548728..548772) Click for BLAST results 94% of length of longest homolog ( 798 nt / 852 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00004276001 - s5 (565826..566623) Click for BLAST results Click for intergenic sequence 83% of length of longest homolog ( 1608 nt / 1938 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00004277001 - s5 complement(566629..568236) Click for BLAST results 86% of length of longest homolog ( 651 nt / 759 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00004278001 - s5 complement(568731..569381) Click for BLAST results 77% of length of longest homolog ( 906 nt / 1173 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00004279001 - s5 complement(569594..570499) Click for BLAST results 93% of length of longest homolog ( 1629 nt / 1758 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00004280001 - s5 (570732..572360) Click for BLAST results 100% of length of longest homolog ( 180 nt / 180 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence KUCA_T00004281001 - s5 (572723..572747,572805..572959) Click for BLAST results 100% of length of longest homolog ( 1068 nt / 1068 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00004282001 - s5 (573078..574145) Click for BLAST results 100% of length of longest homolog ( 2755 nt / 2755 nt ) Click for intergenic sequence Click for intergenic sequence Kcap_MGOB_CEN5 - s5 (574146..576900) - centromere 5 100% of length of longest homolog ( 306 nt / 306 nt ) Click for intergenic sequence Click for intergenic sequence KUCA_T00004283001 - s5 complement(580028..580333) Click for BLAST results 100% of length of longest homolog ( 603 nt / 603 nt ) contains intron(s) Click for intergenic sequence Click for intergenic sequence KUCA_T00004284001 - s5 (582312..582450,582516..582604,582672..583046) Click for BLAST results 90% of length of longest homolog ( 492 nt / 546 nt ) Click for intergenic sequence KUCA_T00004285001 - s5 complement(583697..584188) Click for BLAST results 100% of length of longest homolog ( 1533 nt / 1533 nt ) KUCA_T00004682001 - s5 complement(1307446..1308978) Click for BLAST results 100% of length of longest homolog ( 1200 nt / 1200 nt ) contains intron(s) Click for intergenic sequence KUCA_T00004286001 - s5 (584617..584664,584716..585867) Click for BLAST results 96% of length of longest homolog ( 822 nt / 852 nt ) ATY40_BA7501354 - Chr1 complement(2423767..2424588) - BA75_01354T0 Click for BLAST results 100% of length of longest homolog ( 1938 nt / 1938 nt ) Click for intergenic sequence ATY40_BA7504629 - Chr4 complement(1116429..1118366) - BA75_04629T0 Click for BLAST results 87% of length of longest homolog ( 660 nt / 759 nt ) Click for intergenic sequence Click for intergenic sequence ATY40_BA7504628 - Chr4 complement(1118520..1119179) - BA75_04628T0 Click for BLAST results 74% of length of longest homolog ( 870 nt / 1173 nt ) Click for intergenic sequence Click for intergenic sequence ATY40_BA7504627 - Chr4 complement(1119360..1120229) - BA75_04627T0 Click for BLAST results 93% of length of longest homolog ( 1638 nt / 1758 nt ) Click for intergenic sequence ATY40_BA7504626 - Chr4 (1120508..1122145) - BA75_04626T0 Click for BLAST results 94% of length of longest homolog ( 567 nt / 603 nt ) Click for intergenic sequence ATY40_BA7502170 - Chr2 (2138572..2139138) - BA75_02170T0 Click for BLAST results 84% of length of longest homolog ( 459 nt / 546 nt ) Click for intergenic sequence ATY40_BA7502169 - Chr2 complement(2139209..2139667) - BA75_02169T0 Click for BLAST results 88% of length of longest homolog ( 1344 nt / 1533 nt ) ATY40_BA7503819 - Chr3 complement(866283..867626) - BA75_03819T0 Click for BLAST results 98% of length of longest homolog ( 1704 nt / 1743 nt ) Click for intergenic sequence ATY40_BA7502168 - Chr2 complement(2139948..2141651) - BA75_02168T0 Click for BLAST results 100% of length of longest homolog ( 117 nt / 117 nt ) Click for intergenic sequence Click for intergenic sequence Kpas_ATY40_rRNAcchr2s2142656e2142540 - Chr2 complement(2142540..2142656) - 8S ribosomal RNA 80% of length of longest homolog ( 963 nt / 1200 nt ) Click for intergenic sequence ATY40_BA7502166 - Chr2 (2143588..2144550) - BA75_02166T0 Click for BLAST results 96% of length of longest homolog ( 822 nt / 852 nt ) BQ9382_C1-2585 - Chr1 (907300..908121) - Protein transport protein USE1 Click for BLAST results 96% of length of longest homolog ( 1851 nt / 1938 nt ) Click for intergenic sequence BQ9382_C4-1460 - Chr4 (461350..463200) - SET-domain lysine-N-methyltransferase Click for BLAST results 87% of length of longest homolog ( 660 nt / 759 nt ) Click for intergenic sequence Click for intergenic sequence BQ9382_C4-1455 - Chr4 (460451..461110) Click for BLAST results 74% of length of longest homolog ( 870 nt / 1173 nt ) Click for intergenic sequence Click for intergenic sequence BQ9382_C4-1450 - Chr4 (459402..460271) - Ribonuclease P subunit P29 Click for BLAST results 93% of length of longest homolog ( 1641 nt / 1758 nt ) Click for intergenic sequence BQ9382_C4-1445 - Chr4 complement(457487..459127) - Lipoate-protein ligase A family member Click for BLAST results 94% of length of longest homolog ( 567 nt / 603 nt ) Click for intergenic sequence BQ9382_C2-1615 - Chr2 complement(533132..533698) - COP9 signalosome complex subunit 7 Click for BLAST results 84% of length of longest homolog ( 459 nt / 546 nt ) Click for intergenic sequence BQ9382_C2-1610 - Chr2 (532600..533058) - Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) Click for BLAST results 88% of length of longest homolog ( 1344 nt / 1533 nt ) BQ9382_C3-2535 - Chr3 complement(864643..865986) Click for BLAST results 100% of length of longest homolog ( 1743 nt / 1743 nt ) Click for intergenic sequence BQ9382_C2-1605 - Chr2 (530579..532321) - MFS general substrate transporter like domains Click for BLAST results Click for intergenic sequence 80% of length of longest homolog ( 963 nt / 1200 nt ) Click for intergenic sequence BQ9382_C2-1600 - Chr2 complement(527096..528058) - Mitochondrial N-glycosylase/DNAlyase[includes: 8-oxoguanine DNA glycosylaseDNA-(Apurinic orapyrimidinic site) lyase] Click for BLAST results 100% of length of longest homolog ( 852 nt / 852 nt ) Ptan_3794 - s8 (256977..257828) - Similar to USE1_YEAST Protein transport protein USE1 OS Click for BLAST results 74% of length of longest homolog ( 867 nt / 1173 nt ) Click for intergenic sequence Ptan_1297 - s2 (1391896..1392762) - Similar to POP4_YEAST RNases MRP/P 32.9 kDa subunit OS Click for BLAST results 100% of length of longest homolog ( 1758 nt / 1758 nt ) Click for intergenic sequence Ptan_1296 - s2 complement(1389964..1391721) - Similar to LPLA_YEAS7 Putative lipoate-protein ligase A OS Click for BLAST results 95% of length of longest homolog ( 516 nt / 546 nt ) Ptan_12 - s1 complement(22785..23300) - Similar to DHSD_ASHGO Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial OS Click for BLAST results 96% of length of longest homolog ( 1476 nt / 1533 nt ) Ptan_18 - s1 complement(36337..37812) - No similarities. Click for BLAST results 74% of length of longest homolog ( 882 nt / 1200 nt ) contains intron(s) Click for intergenic sequence Ptan_13 - s1 (23879..23920,24110..24949) - Similar to OGG1_HUMAN N-glycosylase/DNA lyase OS Click for BLAST results 72% of length of longest homolog ( 840 nt / 1173 nt ) YBR257W (POP4) - Chr2 (728885..729724) - Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; binds to the RPR1 RNA subunit in RNase P Click for Info Click for BLAST results 93% of length of longest homolog ( 507 nt / 546 nt ) YLR164W (SHH4) - Chr12 (493883..494389) - Mitochondrial inner membrane protein of unknown function; similar to Tim18p and Sdh4p; a fraction copurifies with Sdh3p, but Shh4p is neither a stoichiometric subunit of succinate dehydrogenase nor of the TIM22 translocase; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner Click for Info Click for BLAST results 94% of length of longest homolog ( 1131 nt / 1200 nt ) Click for intergenic sequence YML060W (OGG1) - Chr13 (151871..153001) - Mitochondrial glycosylase/lyase that specifically excises 7,8-dihydro-8-oxoguanine residues located opposite cytosine or thymine residues in DNA, repairs oxidative damage to mitochondrial DNA, contributes to UVA resistance Click for Info Click for BLAST results MGOB Tabulated Text Format